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IDSCO4126 TypeCDS
From4127517 nt length1488
To4129004 aa length495
Gene pI6.8
Definitionputative membrane protein M.W (Da)53116
NoteSCD72A.12c AseI frg.D
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4103 putative membrane protein5654.0e-162
sgrSGR_3915 putative membrane protein3863.0e-108
samSAM23877_3558 hypothetical protein7620.0e+00
scabSCAB49201 putative membrane protein5931.0e-170

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result

no hits.

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011029453.1 MULTISPECIES: type IV secretory system conjugative DNA trans... 20450.0e+00
WP_003974844.1 MULTISPECIES: type IV secretory system conjugative DNA trans... 20380.0e+00
WP_136209198.1 type IV secretory system conjugative DNA transfer family pro... 20280.0e+00
WP_191851105.1 type IV secretory system conjugative DNA transfer family pro... 20260.0e+00
WP_030868533.1 type IV secretory system conjugative DNA transfer family pro... 20260.0e+00
WP_210985065.1 type VI secretion protein [Streptomyces sp. RK76] >lcl 20190.0e+00
WP_106518678.1 type IV secretory system conjugative DNA transfer family pro... 20170.0e+00
WP_193487608.1 type IV secretory system conjugative DNA transfer family pro... 20100.0e+00
WP_093456608.1 MULTISPECIES: type IV secretory system conjugative DNA trans... 20080.0e+00
WP_189284216.1 type IV secretory system conjugative DNA transfer family pro... 20060.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear