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IDSCO4190 TypeCDS
From4068879 nt length876
To4068004 aa length291
Gene pI5.63
Definitionputative GntR-family transcriptional regulator M.W (Da)32981
Note2SCD46.04 AseI frg.D
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4021 putative GntR-family transcriptional regulator4308.0e-122
samSAM23877_3503 putative GntR-family transcriptional regulator5670.0e+00
scabSCAB49751 putative GntR-family transcriptional regulator4523.0e-128

*avm, Streptomyces avermitilis; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

GntR1Bacterial regulatory proteins, gntR family18-7466.88.9e-19

HTH_411Helix-turn-helix domain35-7629.24.7e-07

MarR_21MarR family21-7128.59.2e-07

HTH_241Winged helix-turn-helix DNA-binding42-7025.18.3e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003974781.1 MULTISPECIES: winged helix-turn-helix domain-containing prot... 15250.0e+00
AIJ14457.2 GntR family transcriptional regulator [Streptomyces lividans TK24... 15120.0e+00
MYS73469.1 GntR family transcriptional regulator [Streptomyces sp. SID5926] 15100.0e+00
WP_109035125.1 winged helix-turn-helix domain-containing protein [Streptomy... 15020.0e+00
WP_115743333.1 winged helix-turn-helix domain-containing protein [Streptomy... 15000.0e+00
WP_226027469.1 winged helix-turn-helix domain-containing protein [Streptomy... 14810.0e+00
EOY49139.1 GntR-family transcriptional regulator DevA, required for proper d... 14740.0e+00
WP_127893433.1 MULTISPECIES: winged helix-turn-helix domain-containing prot... 14700.0e+00
AKZ56550.1 putative GntR-family transcriptional regulator [Streptomyces ambo... 14610.0e+00
OWA06286.1 GntR family transcriptional regulator [Streptomyces sp. CS113] 14610.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear