-- | --

IDSCO4240 TypeCDS
From4021197 nt length1137
To4022333 aa length378
GenemsiK pI6.01
DefinitionABC transporter ATP-binding protein M.W (Da)40396
NoteSCD8A.13c AseI frg.D
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3962 putative multiple sugar ABC transporter ATP-binding protein6520.0e+00
sgrSGR_4024 putative ABC transporter ATP-binding protein6900.0e+00
samSAM23877_3460 sn-glycerol-3-phosphate import ATP-binding protein UgpC7340.0e+00
scabSCAB50161 putative multiple sugar ABC transporter ATP-binding protein (cellobiose transport system ATP-binding protein; smoK)7190.0e+00
saceSACE_4258 sugar ABC transporter, ATP-binding protein4346.0e-123
nfarnfa55400 putative ABC transporter ATP-binding protein4514.0e-128

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ABC_tran1ABC transporter22-163102.42.6e-29

TOBE1TOBE domain306-36733.24.3e-08

TOBE_21TOBE domain280-36824.91.5e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011029527.1 MULTISPECIES: diacetylchitobiose ABC transporter ATP-binding... 19650.0e+00
EOY49186.1 Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC [S... 19640.0e+00
WP_121712738.1 diacetylchitobiose ABC transporter ATP-binding protein MsiK ... 19580.0e+00
WP_087808643.1 MULTISPECIES: diacetylchitobiose ABC transporter ATP-binding... 19570.0e+00
WP_127895434.1 MULTISPECIES: diacetylchitobiose ABC transporter ATP-binding... 19530.0e+00
WP_104635479.1 diacetylchitobiose ABC transporter ATP-binding protein MsiK ... 19500.0e+00
WP_121700970.1 MULTISPECIES: diacetylchitobiose ABC transporter ATP-binding... 19490.0e+00
WP_030187818.1 diacetylchitobiose ABC transporter ATP-binding protein MsiK ... 19480.0e+00
WP_031047742.1 diacetylchitobiose ABC transporter ATP-binding protein MsiK ... 19480.0e+00
WP_115743374.1 diacetylchitobiose ABC transporter ATP-binding protein MsiK ... 19450.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear