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IDSCO4301 TypeCDS
From3950413 nt length840
To3951252 aa length279
Gene pI5.66
Definitionputative DNA-binding protein M.W (Da)30576
NoteSCD95A.34c AseI frg.D
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
scabSCAB50501 putative DNA-binding protein3824.0e-107

*scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain17-7148.57.4e-13

HTH_31Helix-turn-helix21-7026.93.4e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011029566.1 MULTISPECIES: Scr1 family TA system antitoxin-like transcrip... 14670.0e+00
WP_003974673.1 MULTISPECIES: Scr1 family TA system antitoxin-like transcrip... 14610.0e+00
WP_136207385.1 MULTISPECIES: Scr1 family TA system antitoxin-like transcrip... 14590.0e+00
WP_159328694.1 Scr1 family TA system antitoxin-like transcriptional regulat... 14520.0e+00
WP_076975531.1 Scr1 family TA system antitoxin-like transcriptional regulat... 14390.0e+00
WP_226026603.1 helix-turn-helix transcriptional regulator [Streptomyces hyd... 12941.7e-179
WP_030186280.1 Scr1 family TA system antitoxin-like transcriptional regulat... 12751.6e-176
WP_064728527.1 Scr1 family TA system antitoxin-like transcriptional regulat... 12291.6e-169
WP_073729642.1 Scr1 family TA system antitoxin-like transcriptional regulat... 12161.4e-167
WP_226486586.1 helix-turn-helix transcriptional regulator [Streptomyces par... 12118.7e-167

PSORT result

LocalizationCertaintyPSORT said
Not Clear