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IDSCO4308 TypeCDS
From3945200 nt length963
To3946162 aa length320
Gene pI7.67
Definitionputative transcriptional regulator M.W (Da)32531
NoteSCD95A.41c AseI frg.D
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3923 putative RpiR-family transcriptional regulator3824.0e-107
sgrSGR_3199 putative RpiR-family transcriptional regulator4679.0e-133
samSAM23877_3404 Transcriptional regulator4884.0e-176
scabSCAB50601 putative RpiR-family transcriptional regulator4545.0e-129

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SIS1SIS domain154-28381.44.4e-23

HTH_61Helix-turn-helix domain, rpiR family28-10150.21.7e-13

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
AIJ14345.2 transcriptional regulator [Streptomyces lividans TK24] >gb 11044.7e-149
WP_003974666.1 MULTISPECIES: MurR/RpiR family transcriptional regulator [St... 11035.5e-149
WP_162833243.1 MurR/RpiR family transcriptional regulator [Streptomyces sp.... 10931.9e-147
AXL90092.1 RpiR family transcriptional regulator [Streptomyces sp. CB09001] 10932.1e-147
WP_121712919.1 MurR/RpiR family transcriptional regulator [Streptomyces sp.... 10904.7e-147
WP_007450764.1 MurR/RpiR family transcriptional regulator [Streptomyces coe... 10843.7e-146
WP_202493466.1 MULTISPECIES: MurR/RpiR family transcriptional regulator [St... 10813.8e-146
NEB07436.1 MurR/RpiR family transcriptional regulator [Streptomyces coelicof... 10801.8e-145
WP_087790507.1 MULTISPECIES: MurR/RpiR family transcriptional regulator [un... 10791.9e-145
NHI08914.1 RpiR family transcriptional regulator [Streptomyces sp. KO7888] 10783.2e-145

PSORT result

LocalizationCertaintyPSORT said
Not Clear