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IDSCO4337 TypeCDS
From3916215 nt length1380
To3914836 aa length459
Gene pI11.36
Definitionputative integral membrane efflux protein M.W (Da)48114
NoteSCD12A.20 AseI frg.D
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3894 putative integral membrane efflux protein6470.0e+00
sgrSGR_3162 putative permease of the major facilitator superfamily6176.0e-178
samSAM23877_3368 putative integral membrane efflux protein7820.0e+00
scabSCAB50991 putative integral membrane efflux protein6216.0e-179
saceSACE_0612 probable multidrug efflux transport protein3194.0e-88
nfarnfa35850 putative transporter1226.0e-29

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

MFS_31Transmembrane secretion effector34-424178.71.4e-52

MFS_12Major Facilitator Superfamily49-326, 289-425105.42.7e-30

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003974638.1 MULTISPECIES: MFS transporter [Streptomyces] >gb 17030.0e+00
WP_109035361.1 MFS transporter [Streptomyces rubrogriseus] >gb 17030.0e+00
WP_203696875.1 MFS transporter [Streptomyces rubrogriseus] 17030.0e+00
WP_153179292.1 MULTISPECIES: MFS transporter [unclassified Streptomyces] >g... 16940.0e+00
WP_164249538.1 MFS transporter [Streptomyces coelicoflavus] >gb 16850.0e+00
KKD13174.1 MFS transporter [Streptomyces sp. WM6391] >gb 16840.0e+00
NEC36498.1 MFS transporter [Streptomyces rubrogriseus] 16840.0e+00
WP_007450856.1 MULTISPECIES: MFS transporter [Streptomyces] >gb 16830.0e+00
WP_159328723.1 MFS transporter [Streptomyces tendae] 16760.0e+00
WP_115743459.1 MFS transporter [Streptomyces sp. CB09001] >gb 16690.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear