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IDSCO4340 TypeCDS
From3913142 nt length1650
To3911493 aa length549
Gene pI8.45
Definitionputative integrase M.W (Da)61802
NoteSCD12A.23 AseI frg.D
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5555 putative serine-family recombinase/integrase1382.0e-33
samSAM23877_3394 hypothetical protein1872.0e-53
scabSCAB53221 putative serine-family recombinase/integrase1297.0e-31

*avm, Streptomyces avermitilis; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Resolvase1Resolvase, N terminal domain11-16980.11.6e-22

Recombinase1Recombinase199-31855.74.8e-15

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003974635.1 MULTISPECIES: recombinase family protein [Streptomyces] >gb 28430.0e+00
WP_093456665.1 MULTISPECIES: recombinase family protein [unclassified Strep... 28390.0e+00
WP_191849939.1 recombinase family protein [Streptomyces anthocyanicus] 28310.0e+00
WP_043729901.1 recombinase family protein [Streptomyces zinciresistens] 28020.0e+00
WP_210988892.1 recombinase family protein [Streptomyces sp. F63] >lcl 27980.0e+00
WP_106413698.1 recombinase family protein [Streptomyces sp. DH-12] >gb 27890.0e+00
WP_215212279.1 recombinase family protein [Streptomyces sp. Vc74B-19] >lcl 27880.0e+00
WP_086681860.1 recombinase family protein [Streptomyces rubiginosus] 27870.0e+00
WP_093724610.1 recombinase family protein [Streptomyces sp. DI166] >emb 27870.0e+00
WP_112465454.1 recombinase family protein [Streptomyces triticisoli] 27850.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear