-- | --

IDSCO4344 TypeCDS
From3908948 nt length846
To3909793 aa length281
Gene pI10.85
Definitionputative transposase M.W (Da)31801
NoteSCD12A.27c AseI frg.D
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1204 putative IS630 family ISPsy1-like transposase4584.0e-130
scabSCAB44241 putative transposase4862.0e-138
saceSACE_5133 IS630 family transposase1632.0e-41

*avm, Streptomyces avermitilis; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_321Homeodomain-like domain61-14049.06.5e-13

HTH_291Winged helix-turn helix37-9248.36.8e-13

HTH_281Helix-turn-helix domain43-8629.36.3e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003974632.1 MULTISPECIES: IS630 family transposase [Streptomyces] >gb 14800.0e+00
WP_093456666.1 MULTISPECIES: IS630 family transposase [unclassified Strepto... 14760.0e+00
WP_106518278.1 IS630 family transposase [Streptomyces sp. 111WW2] 14740.0e+00
AIJ14312.1 transposase [Streptomyces lividans TK24] >gb 14700.0e+00
PSK50932.1 hypothetical protein B0E38_05216 [Streptomyces sp. 111WW2] 14640.0e+00
WP_202493470.1 MULTISPECIES: IS630 family transposase [Streptomyces] 14290.0e+00
13530.0e+00
WP_220131498.1 IS630 family transposase [Streptomyces ipomoeae] 13530.0e+00
13290.0e+00
WP_029184674.1 IS630 family transposase [Streptomyces acidiscabies] >lcl 13250.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear