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IDSCO4357 TypeCDS
From3896313 nt length1047
To3895267 aa length348
Gene pI4.85
Definitionputative integral membrane protein M.W (Da)36359
NoteSCD19.12 AseI frg.D
SignalP v.4.0Signal peptide | plot Categorymiscellaneous


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3884 hypothetical protein3641.0e-101
sgrSGR_3121 conserved hypothetical protein2732.0e-74
samSAM23877_3363 Integral membrane protein5220.0e+00
scabSCAB51051 putative secreted protein3894.0e-109

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result

no hits.

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
MYU43877.1 WD40 repeat domain-containing protein [Streptomyces sp. SID7813] ... 13920.0e+00
GHA52323.1 hypothetical protein GCM10010391_41700 [Streptomyces anthocyanic... 13850.0e+00
AXL90123.1 hypothetical protein C4J65_18900 [Streptomyces sp. CB09001] 13850.0e+00
MYS70957.1 WD40 repeat domain-containing protein [Streptomyces sp. SID5926] 13830.0e+00
EOY49300.1 hypothetical protein SLI_4592 [Streptomyces lividans 1326] >lcl 13680.0e+00
EFD67702.1 integral membrane protein [Streptomyces lividans TK24] 13480.0e+00
OWA05288.1 hypothetical protein B9W62_21755 [Streptomyces sp. CS113] 13290.0e+00
QFX83300.1 WD40 repeat domain-containing protein [Streptomyces sp. SYP-A7193... 13240.0e+00
MYS54076.1 WD40 repeat domain-containing protein [Streptomyces sp. SID6013] 13220.0e+00
OWA12712.1 hypothetical protein B9W64_20715 [Streptomyces sp. CS159] 13220.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear