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IDSCO4404 TypeCDS
From3844037 nt length789
To3844825 aa length262
Gene pI6.95
Definitionputative ABC transport system integral membrane protein M.W (Da)27770
NoteSC6F11.02c AseI frg.D
SignalP v.4.0Non-secretory protein | plot Categorymiscellaneous

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_694 putative ABC transporter permease protein3531.0e-98
sgrSGR_4319 putative ABC transporter permease protein4031.0e-113
samSAM23877_3033 ABC transporter integral membrane protein3732.0e-132
scabSCAB86791 putative ABC transporter permease protein3779.0e-106
nfarnfa55140 putative ABC transporter membrane protein1949.0e-51

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ABC2_membrane1ABC-2 type transporter13-226104.73.8e-30

ABC2_membrane_31ABC-2 family transporter protein60-25457.89e-16

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003974578.1 MULTISPECIES: ABC transporter permease [Streptomyces] >gb 9648.8e-130
WP_191849901.1 ABC transporter permease [Streptomyces anthocyanicus] >dbj 9571.2e-128
WP_121713200.1 MULTISPECIES: ABC transporter permease [Streptomyces] >dbj 9534.4e-128
WP_212730449.1 ABC transporter permease [Streptomyces sp. V17-9] >gb 9396.5e-126
WP_165287856.1 ABC transporter permease [Streptomyces sp. SID10362] >gb 9371.0e-125
WP_125630746.1 MULTISPECIES: ABC transporter permease [unclassified Strepto... 9352.1e-125
WP_102931950.1 ABC transporter permease [Streptomyces diastaticus] 9343.4e-125
MYS54311.1 ABC transporter permease [Streptomyces sp. SID6013] 9319.9e-125
WP_197923552.1 ABC transporter permease [Streptomyces sp. HB-N217] >lcl 9301.3e-124
WP_109035463.1 ABC transporter permease [Streptomyces rubrogriseus] 9301.4e-124

PSORT result

LocalizationCertaintyPSORT said
Not Clear