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IDSCO4413 TypeCDS
From3835824 nt length1035
To3836858 aa length344
Gene pI6.65
Definitionputative araC family transcriptional regulatory protein M.W (Da)37003
NoteSC6F11.11c AseI frg.D
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3832 putative AraC-family transcriptional regulator5062.0e-144
sgrSGR_3046 putative AdpA-family transcriptional regulator5202.0e-148
samSAM23877_3320 AraC family transcription regulator6130.0e+00
saceSACE_7232 AraC-family transcriptional regulator3985.0e-112

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_181Helix-turn-helix domain255-33275.42.8e-21

HTH_AraC1Bacterial regulatory helix-turn-helix proteins, AraC family246-28255.92.7e-15

DJ-1_PfpI1DJ-1/PfpI family115-19343.52.5e-11

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003974569.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 17710.0e+00
WP_191849897.1 helix-turn-helix domain-containing protein [Streptomyces ant... 17690.0e+00
WP_136209313.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 17650.0e+00
WP_121713169.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 17510.0e+00
WP_189284281.1 helix-turn-helix domain-containing protein [Streptomyces ant... 17490.0e+00
WP_164277602.1 helix-turn-helix domain-containing protein [Streptomyces rub... 16920.0e+00
MYS71937.1 helix-turn-helix domain-containing protein [Streptomyces sp. SID5... 16910.0e+00
WP_109035482.1 helix-turn-helix domain-containing protein [Streptomyces rub... 16750.0e+00
WP_115746527.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 16650.0e+00
WP_104636397.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 16380.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear