-- | --

IDSCO4493 TypeCDS
From3754807 nt length504
To3754304 aa length167
Gene pI5.32
Definitionputative asnC-family transcriptional regulator M.W (Da)17901
NoteSCD69.13 AseI frg.D
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4812 putative AsnC-family transcriptional regulator2315.0e-62
sgrSGR_4205 putative AsnC-family transcriptional regulator2521.0e-68
samSAM23877_4307 AsnC-family transcriptional regulator%2C in menaquinone synthesis cluster2698.0e-95
scabSCAB38351 putative AsnC-family transcriptional regulator2561.0e-69

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

AsnC_trans_reg1Lrp/AsnC ligand binding domain82-15369.81.3e-19

HTH_241Winged helix-turn-helix DNA-binding29-6337.41.2e-09

HTH_AsnC-type1AsnC-type helix-turn-helix domain29-5737.41.5e-09

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
MYU44012.1 AsnC family transcriptional regulator [Streptomyces sp. SID7813] ... 8553.3e-116
WP_003974456.1 MULTISPECIES: Lrp/AsnC family transcriptional regulator [Str... 7051.4e-93
EOY49480.1 AsnC-family transcriptional regulator, in menaquinone synthesis c... 7042.6e-93
WP_007443788.1 MULTISPECIES: Lrp/AsnC family transcriptional regulator [Str... 7023.9e-93
WP_164411417.1 MULTISPECIES: Lrp/AsnC family transcriptional regulator [Str... 6981.4e-92
WP_217245638.1 Lrp/AsnC ligand binding domain-containing protein [Streptomy... 6981.5e-92
WP_193486488.1 Lrp/AsnC family transcriptional regulator [Streptomyces anth... 6972.3e-92
WP_217170292.1 Lrp/AsnC ligand binding domain-containing protein [Streptomy... 6972.4e-92
WP_030401669.1 MULTISPECIES: Lrp/AsnC family transcriptional regulator [Str... 6963.4e-92
WP_077798981.1 Lrp/AsnC family transcriptional regulator [Streptomyces sp. ... 6954.0e-92

PSORT result

LocalizationCertaintyPSORT said
Not Clear