-- | --

IDSCO4564 TypeCDS
From3686311 nt length756
To3685556 aa length251
GenenuoC pI4.85
DefinitionnuoC NADH dehydrogenase subunit M.W (Da)27935
NoteSCD16A.19c AseI frg.D
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4839 putative NADH dehydrogenase I chain C (complex I)4515.0e-128
sgrSGR_2982 putative NADH dehydrogenase chain C4161.0e-117
samSAM23877_4385 NADH-quinone oxidoreductase subunit C4895.0e-179
scabSCAB38071 putative NADH dehydrogenase I chain C (complex I)4646.0e-132
saceSACE_6900 putative NADH dehydrogenase chain C2761.0e-75
nfarnfa26650 putative NADH dehydrogenase I chain C3178.0e-88

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Complex1_30kDa1Respiratory-chain NADH dehydrogenase, 30 Kd subunit110-231142.58.3e-42

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011029733.1 MULTISPECIES: NADH-quinone oxidoreductase subunit C [Strepto... 12561.2e-174
WP_109035734.1 NADH-quinone oxidoreductase subunit C [Streptomyces rubrogri... 12552.0e-174
WP_115743626.1 NADH-quinone oxidoreductase subunit C [Streptomyces sp. CB09... 12501.0e-173
MYS72658.1 NADH-quinone oxidoreductase subunit C [Streptomyces sp. SID5926] 12481.9e-173
WP_016327001.1 MULTISPECIES: NADH-quinone oxidoreductase subunit C [Strepto... 12482.4e-173
WP_189737564.1 NADH-quinone oxidoreductase subunit C [Streptomyces tendae] ... 12421.6e-172
WP_127893446.1 MULTISPECIES: NADH-quinone oxidoreductase subunit C [unclass... 12387.0e-172
WP_159329409.1 NADH-quinone oxidoreductase subunit C [Streptomyces tendae] 12388.2e-172
EFD67460.1 trifunctional NADH dehydrogenase I subunit B/C/D [Streptomyces li... 12461.1e-171
WP_217170200.1 NADH-quinone oxidoreductase subunit C [Streptomyces sp. AC51... 12352.5e-171

PSORT result

LocalizationCertaintyPSORT said
Not Clear