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IDSCO4565 TypeCDS
From3685559 nt length1323
To3684237 aa length440
GenenuoD pI5.3
DefinitionnuoD NADH dehydrogenase subunit M.W (Da)48412
NoteSCD16A.18c AseI frg.D
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4840 putative NADH dehydrogenase I chain D (complex I)8650.0e+00
sgrSGR_2981 putative NADH dehydrogenase chain D8530.0e+00
samSAM23877_4386 NADH-quinone oxidoreductase subunit D 18810.0e+00
scabSCAB38061 putative NADH dehydrogenase I chain D (complex I)8700.0e+00
saceSACE_6899 NADH dehydrogenase I chain D6330.0e+00
nfarnfa26640 putative NADH dehydrogenase I chain D7020.0e+00

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Complex1_49kDa1Respiratory-chain NADH dehydrogenase, 49 Kd subunit155-440381.02.2e-114

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011029734.1 NADH-quinone oxidoreductase subunit D [Streptomyces coelicol... 21890.0e+00
WP_003974381.1 MULTISPECIES: NADH-quinone oxidoreductase subunit D [Strepto... 21840.0e+00
WP_121715435.1 NADH-quinone oxidoreductase subunit D [Streptomyces sp. E5N9... 21800.0e+00
WP_030145370.1 MULTISPECIES: NADH-quinone oxidoreductase subunit D [Strepto... 21770.0e+00
WP_115743627.1 NADH-quinone oxidoreductase subunit D [Streptomyces sp. CB09... 21710.0e+00
WP_087807815.1 NADH-quinone oxidoreductase subunit D [Streptomyces sp. CS11... 21690.0e+00
WP_104632443.1 NADH-quinone oxidoreductase subunit D [Streptomyces sp. MH60... 21690.0e+00
WP_133887593.1 NADH-quinone oxidoreductase subunit D [Streptomyces sp. BK20... 21690.0e+00
WP_102928297.1 MULTISPECIES: NADH-quinone oxidoreductase subunit D [Strepto... 21680.0e+00
WP_189737567.1 NADH-quinone oxidoreductase subunit D [Streptomyces tendae] ... 21680.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear