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IDSCO4577 TypeCDS
From3670111 nt length2031
To3668081 aa length676
GenerecQ pI5.21
Definitionputative helicase M.W (Da)72899
NoteSCD16A.06c AseI frg.D
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4851 putative ATP-dependent DNA helicase10370.0e+00
sgrSGR_2970 putative ATP-dependent DNA helicase10080.0e+00
samSAM23877_4398 ATP-dependent DNA helicase RecQ11470.0e+00
scabSCAB37941 putative ATP-dependent DNA helicase10520.0e+00
saceSACE_3331 ATP-dependent DNA helicase8660.0e+00
nfarnfa44830 putative helicase8680.0e+00

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

RQC1RQC domain419-533122.56.4e-36

HRDC1HRDC domain563-62572.61.7e-20

Helicase_C1Helicase conserved C-terminal domain236-34165.64.1e-18

RecQ_Zn_bind1RecQ zinc-binding354-41764.11.3e-17

DEAD1DEAD/DEAH box helicase40-19655.36e-15

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011029740.1 MULTISPECIES: DNA helicase RecQ [Streptomyces] >gb 28510.0e+00
WP_030867461.1 MULTISPECIES: DNA helicase RecQ [Streptomyces] >gb 28460.0e+00
WP_093456760.1 MULTISPECIES: DNA helicase RecQ [unclassified Streptomyces] ... 28430.0e+00
WP_189284499.1 DNA helicase RecQ [Streptomyces anthocyanicus] >dbj 28340.0e+00
WP_121715418.1 DNA helicase RecQ [Streptomyces sp. E5N91] 28320.0e+00
MYS69864.1 DNA helicase RecQ [Streptomyces sp. SID5926] 28180.0e+00
WP_164275681.1 DNA helicase RecQ [Streptomyces rubrogriseus] >gb 28120.0e+00
WP_109035854.1 DNA helicase RecQ [Streptomyces rubrogriseus] 28070.0e+00
EFD67447.1 ATP-dependent DNA helicase RecQ [Streptomyces lividans TK24] 28060.0e+00
WP_134654688.1 DNA helicase RecQ [Streptomyces sp. H23] 27910.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear