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IDSCO4743 TypeCDS
From3510140 nt length606
To3509535 aa length201
Gene pI9.76
Definitionundefined product M.W (Da)21958
NoteSC6G4.21 AseI frg.D
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
samSAM23877_4538 Transcriptional regulator3716.0e-134

*sam, Streptomyces ambofaciens ATCC 23877;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_31Helix-turn-helix18-7258.25.8e-16

HTH_311Helix-turn-helix domain14-7258.36.3e-16

Cupin_21Cupin domain130-18555.23.7e-15

HTH_191Helix-turn-helix domain15-7237.71.5e-09

HTH_251Helix-turn-helix domain17-5030.91.6e-07

HTH_261Cro/C1-type HTH DNA-binding domain17-7229.09.6e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011029834.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 8502.2e-114
T... 8494.0e-114
WP_016327055.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 8381.7e-112
AIJ13912.1 transcriptional regulator [Streptomyces lividans TK24] >gb 8372.8e-112
WP_189284374.1 helix-turn-helix domain-containing protein [Streptomyces ant... 8338.6e-112
AXL90448.1 XRE family transcriptional regulator [Streptomyces sp. CB09001] 8311.7e-111
WP_121709903.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 8302.4e-111
WP_162833260.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 8303.7e-111
WP_109034256.1 helix-turn-helix domain-containing protein [Streptomyces rub... 8294.2e-111
WP_127896979.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 8251.6e-110

PSORT result

LocalizationCertaintyPSORT said
Not Clear