-- | --

IDSCO4897 TypeCDS
From3336604 nt length954
To3335651 aa length317
Gene pI8.77
Definitionputative transcriptional regulator M.W (Da)34335
Note2SCK8.23 AseI frg.K
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3360 putative LysR-family transcriptional regulator4985.0e-142
sgrSGR_2643 putative LysR-family transcriptional regulator5077.0e-145
samSAM23877_4719 putative HTH-type transcriptional regulator YybE5990.0e+00
scabSCAB34891 putative LysR-family transcriptional regulator5423.0e-155
saceSACE_1031 LysR-family transcriptional regulator1963.0e-51
nfarnfa14310 putative transcriptional regulator1723.0e-44

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

LysR_substrate1LysR substrate binding domain110-310166.25.7e-49

HTH_11Bacterial regulatory helix-turn-helix protein, lysR family27-8463.11.6e-17

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
PSK50651.1 HTH-type transcriptional regulator GltC [Streptomyces sp. 111WW2]... 13300.0e+00
TYP48204.1 t... 13290.0e+00
WP_003974076.1 MULTISPECIES: LysR family transcriptional regulator [Strepto... 13290.0e+00
WP_011029934.1 MULTISPECIES: LysR family transcriptional regulator [Strepto... 13280.0e+00
TYP281... 13280.0e+00
EHN76157.1 transcriptional regulator [Streptomyces coelicoflavus ZG0656] 13270.0e+00
WP_042825048.1 MULTISPECIES: LysR family transcriptional regulator [Strepto... 13270.0e+00
GHA55994.1 transcriptional regulator [Streptomyces tendae] 13270.0e+00
WP_189738148.1 LysR family transcriptional regulator [Streptomyces tendae] 13260.0e+00
WP_127892893.1 LysR family transcriptional regulator [Streptomyces sp. S10(... 13250.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear