ID	SCO4908	Type	CDS
From	3326956	nt length	591
To	3326366	aa length	196
Gene		pI	4.88
Definition	putative RNA polymerase sigma factor (fragment)	M.W (Da)	22456
Note	2SCK8.34	AseI frg.	K
SignalP v.4.0	Non-secretory protein | plot	Category

Orthologs (if any)

Pfam search result

	Model	No.	Description	Position (aa)	Score	E-value
	Sigma70_r4_2	1	Sigma-70, region 4	125-175	53.9	9.5e-15
	Sigma70_r4	1	Sigma-70, region 4	128-177	49.1	2.6e-13
	Sigma70_r2	1	Sigma-70 region 2	35-97	45.0	6.1e-12

BLAST search result (top 10 hits)

ID	Description	Score	E-value
WP_016327117.1	MULTISPECIES: SigE family RNA polymerase sigma factor [Strep...	1024	2.5e-140
WP_210984234.1	SigE family RNA polymerase sigma factor [Streptomyces sp. RK...	1023	3.2e-140
EFD67136.1	RNA polymerase sigma factor [Streptomyces lividans TK24]	1020	5.9e-140
MYU44430.1	SigE family RNA polymerase sigma factor [Streptomyces sp. SID7813...	1017	6.0e-140
WP_189284897.1	SigE family RNA polymerase sigma factor [Streptomyces anthoc...	1019	1.3e-139
WP_030872174.1	SigE family RNA polymerase sigma factor [Streptomyces violac...	1015	6.3e-139
WP_059302196.1	MULTISPECIES: SigE family RNA polymerase sigma factor [Strep...	1009	4.1e-138
WP_186776845.1	SigE family RNA polymerase sigma factor [Streptomyces sp. SS...	1009	5.5e-138
WP_164411741.1	MULTISPECIES: SigE family RNA polymerase sigma factor [Strep...	1008	5.9e-138
AZM75902.1	SigE family RNA polymerase sigma factor [Streptomyces sp. KPB2]	1003	8.1e-138

PSORT result

Localization	Certainty	PSORT said
Not Clear

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