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IDSCO4965 TypeCDS
From3266984 nt length498
To3267481 aa length165
Gene pI4.3
Definitionputative transcription elongation factor M.W (Da)17810
Note2SCK31.25c AseI frg.K
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3301 putative transcription elongation factor2644.0e-72
sgrSGR_2564 putative transcription elongation factor2874.0e-79
samSAM23877_4781 Transcription elongation factor GreA3288.0e-118
scabSCAB34321 putative transcription elongation factor2983.0e-82
saceSACE_0907 transcription elongation factor G1538.0e-39
nfarnfa48260 putative transcription elongation factor1643.0e-42

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

GreA_GreB_N1Transcription elongation factor, N-terminal10-7987.73.8e-25

GreA_GreB1Transcription elongation factor, GreA/GreB, C-term86-16154.29.1e-15

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003974011.1 MULTISPECIES: transcription elongation factor GreA [Streptom... 8588.0e-117
WP_115743918.1 transcription elongation factor GreA [Streptomyces sp. CB090... 8561.7e-116
WP_030145697.1 transcription elongation factor GreA [Streptomyces violaceor... 8552.7e-116
WP_052839654.1 transcription elongation factor GreA [Streptomyces sp. MH60]... 8543.8e-116
WP_202492525.1 MULTISPECIES: transcription elongation factor GreA [Streptom... 8537.3e-116
WP_109033147.1 transcription elongation factor GreA [Streptomyces rubrogris... 8511.0e-115
WP_133887093.1 transcription elongation factor GreA [Streptomyces sp. BK208... 8465.4e-115
WP_059301015.1 MULTISPECIES: transcription elongation factor GreA [Streptom... 8465.7e-115
WP_055418146.1 MULTISPECIES: transcription elongation factor GreA [Streptom... 8457.8e-115
WP_127895173.1 MULTISPECIES: transcription elongation factor GreA [Streptom... 8459.6e-115

PSORT result

LocalizationCertaintyPSORT said
Not Clear