-- | --

IDSCO5010 TypeCDS
From3220265 nt length951
To3219315 aa length316
Gene pI10.48
Definitionputative integral membrane protein M.W (Da)33722
NoteSCK15.12 AseI frg.K
SignalP v.4.0Non-secretory protein | plot Categorymiscellaneous

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3252 hypothetical protein3056.0e-84
sgrSGR_2526 putative integral membrane protein4092.0e-115
samSAM23877_4816 putative integral membrane protein4977.0e-180
scabSCAB33791 putative integral membrane protein3453.0e-96

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

T2SSF1Type II secretion system (T2SS), protein F149-26963.81.3e-17

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011030000.1 MULTISPECIES: type II secretion system F family protein [Str... 10652.1e-143
WP_003973967.1 MULTISPECIES: type II secretion system F family protein [Str... 10652.3e-143
WP_030872578.1 MULTISPECIES: type II secretion system F family protein [Str... 10643.4e-143
WP_109033188.1 type II secretion system F family protein [Streptomyces rubr... 10565.1e-142
WP_189738480.1 type II secretion system F family protein [Streptomyces tend... 10556.5e-142
WP_115743959.1 type II secretion system F family protein [Streptomyces sp. ... 10549.6e-142
WP_061442773.1 type II secretion system F family protein [Streptomyces sp. ... 10495.1e-141
MYS55481.1 hypothetical protein [Streptomyces sp. SID6013] 10442.8e-140
WP_104633066.1 type II secretion system F family protein [Streptomyces sp. ... 10364.6e-139
WP_134654509.1 type II secretion system F family protein [Streptomyces sp. ... 10358.4e-139

PSORT result

LocalizationCertaintyPSORT said
Not Clear