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IDSCO5017 TypeCDS
From3214982 nt length1098
To3213885 aa length365
Gene pI9.58
Definitionputative regulatory protein M.W (Da)40343
NoteSCK15.19 AseI frg.K
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_67 putative regulatory protein1812.0e-46
sgrSGR_6816 putative AraC-family transcriptional regulator1803.0e-46
samSAM23877_1312 putative transcriptional regulator1374.0e-38
scabSCAB58461 putative AraC-family transcriptional regulator2011.0e-52

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

AraC_binding_21AraC-binding-like domain46-22379.32.4e-22

HTH_181Helix-turn-helix domain264-34463.41.6e-17

HTH_AraC1Bacterial regulatory helix-turn-helix proteins, AraC family311-34436.82.6e-09

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011030006.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 18380.0e+00
WP_093456906.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 18270.0e+00
WP_063628615.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 18220.0e+00
WP_193487139.1 helix-turn-helix domain-containing protein [Streptomyces ant... 18180.0e+00
WP_191850674.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 18170.0e+00
WP_136207767.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 18120.0e+00
WP_030872559.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 18020.0e+00
WP_161270183.1 helix-turn-helix domain-containing protein [Streptomyces coe... 17350.0e+00
REH23265.1 AraC family transcriptional regulator [Streptomyces sp. 2221.1] >... 17240.0e+00
AIJ13648.1 AraC family transcription regulator [Streptomyces lividans TK24] ... 17200.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear