-- | --

IDSCO5056 TypeCDS
From3171611 nt length1209
To3172819 aa length402
Gene pI7.11
Definitionputative exoribonuclease large subunit M.W (Da)43882
NoteSCK7.29c AseI frg.K
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3211 putative exoribonuclease large subunit6400.0e+00
sgrSGR_2474 putative exoribonuclease large subunit6420.0e+00
samSAM23877_4854 Exodeoxyribonuclease 7 large subunit7490.0e+00
scabSCAB33481 putative exoribonuclease large subunit6890.0e+00
saceSACE_0937 putative exodeoxyribonuclease VII large subunit3919.0e-110
nfarnfa47970 putative exodeoxyribonuclease VII large subunit3653.0e-102

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Exonuc_VII_L2Exonuclease VII, large subunit129-350, 334-397240.72.4e-71

tRNA_anti_21OB-fold nucleic acid binding domain12-10561.18.2e-17

tRNA_anti-codon1OB-fold nucleic acid binding domain30-10737.02.3e-09

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011030027.1 MULTISPECIES: exodeoxyribonuclease VII large subunit [Strept... 18780.0e+00
18780.0e+00
GHA62410.1 exodeoxyribonuclease 7 large subunit [Streptomyces anthocyanicus... 18740.0e+00
WP_003973922.1 MULTISPECIES: exodeoxyribonuclease VII large subunit [Strept... 18740.0e+00
GGL81499.1 exodeoxyribonuclease 7 large subunit [Streptomyces anthocyanicus... 18690.0e+00
GHA57325.1 exodeoxyribonuclease 7 large subunit [Streptomyces tendae] 18670.0e+00
WP_087807451.1 MULTISPECIES: exodeoxyribonuclease VII large subunit [Strept... 18670.0e+00
WP_189285331.1 exodeoxyribonuclease VII large subunit [Streptomyces anthocy... 18670.0e+00
WP_093456921.1 MULTISPECIES: exodeoxyribonuclease VII large subunit [unclas... 18670.0e+00
WP_153178148.1 exodeoxyribonuclease VII large subunit [Streptomyces sp. SYP... 18660.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear