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IDSCO5058 TypeCDS
From3169523 nt length1017
To3168507 aa length338
GeneispH pI4.55
Definitionputative 4-hydroxy-3-methylbut-2-enyl diphosphate reductase M.W (Da)36609
NoteSCK7.31 SCBAC20F6.01 AseI frg.K
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3210 putative 4-hydroxy-3-methylbut-2-enyl diphosphate reductase5601.0e-160
sgrSGR_2472 putative 4-hydroxy-3-methylbut-2-enyl diphosphate5661.0e-162
samSAM23877_4856 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase%2C 4Fe-4S protein6640.0e+00
scabSCAB33471 putative 4-hydroxy-3-methylbut-2-enyl diphosphate reductase6078.0e-175
saceSACE_0939 4-hydroxy-3-methylbut-2-enyl diphosphate reductase4517.0e-128
nfarnfa47950 putative isoprenoid biosynthesis protein4131.0e-116

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

LYTB1LytB protein12-289298.72.9e-89

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003973920.1 MULTISPECIES: 4-hydroxy-3-methylbut-2-enyl diphosphate reduc... 17040.0e+00
WP_164278822.1 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Streptom... 17000.0e+00
WP_109033229.1 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Streptom... 16960.0e+00
AIJ13608.2 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Streptomyces ... 16880.0e+00
WP_127895447.1 MULTISPECIES: 4-hydroxy-3-methylbut-2-enyl diphosphate reduc... 16800.0e+00
WP_087807449.1 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Streptom... 16790.0e+00
WP_107071725.1 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Streptom... 16770.0e+00
WP_210964216.1 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Streptom... 16760.0e+00
WP_189738589.1 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Streptom... 16750.0e+00
WP_133887162.1 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Streptom... 16740.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear