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IDSCO5095 TypeCDS
From3131086 nt length573
To3130514 aa length190
Gene pI7.96
DefinitionORF9 putative DNA-binding protein M.W (Da)20620
NoteSCBAC28G1.21 AseI frg.N
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
sgrSGR_3079 putative transcriptional regulator2362.0e-63

*sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain12-7055.16.3e-15

HTH_31Helix-turn-helix16-7050.21.8e-13

Cupin_21Cupin domain119-17749.32.6e-13

HTH_191Helix-turn-helix domain14-7137.71.4e-09

HTH_261Cro/C1-type HTH DNA-binding domain15-7137.12.8e-09

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011030053.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 9523.0e-130
EFD66954.1 DNA-binding protein [Streptomyces lividans TK24] 9491.1e-129
WP_121708626.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 9481.3e-129
WP_164273927.1 helix-turn-helix domain-containing protein [Streptomyces rub... 9471.6e-129
MYS77102.1 helix-turn-helix domain-containing protein [Streptomyces sp. SID5... 9453.8e-129
WP_136208087.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 9444.9e-129
WP_109033243.1 helix-turn-helix domain-containing protein [Streptomyces rub... 9374.7e-128
WP_030400785.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 9298.7e-127
WP_031048396.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 9281.2e-126
WP_031082509.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 9271.8e-126

PSORT result

LocalizationCertaintyPSORT said
Not Clear