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IDSCO5119 TypeCDS
From3101049 nt length918
To3100132 aa length305
Gene pI8.7
Definitionputative peptide transport system integral membrane protein M.W (Da)31884
NoteSC9E12.04 AseI frg.N
SignalP v.4.0Non-secretory protein | plot Categorymiscellaneous


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3147 putative peptide ABC transporter permease protein4591.0e-130
sgrSGR_2411 putative peptide ABC transporter permease protein4508.0e-128
samSAM23877_4903 Peptide transport system integral membrane protein5540.0e+00
scabSCAB31411 putative peptide ABC transporter permease protein5001.0e-142
saceSACE_0846 ABC peptide transporter, permease component2632.0e-71

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BPD_transp_11Binding-protein-dependent transport system inner membrane component121-30592.62.2e-26

OppC_N1N-terminal TM domain of oligopeptide transport permease C28-6536.72.8e-09

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
MYU44642.1 ABC transporter permease subunit [Streptomyces sp. SID7813] >gb 12542.0e-172
MYS71833.1 ABC transporter permease subunit [Streptomyces sp. SID5926] 12506.6e-172
WP_161270186.1 MULTISPECIES: ABC transporter permease [Streptomyces] >lcl 12527.0e-172
WP_003973858.1 MULTISPECIES: ABC transporter permease [Streptomyces] >gb 12511.1e-171
WP_030145833.1 ABC transporter permease [Streptomyces violaceorubidus] 12465.8e-171
WP_162495243.1 MULTISPECIES: ABC transporter permease [unclassified Strepto... 12458.4e-171
AXL93432.1 peptide ABC transporter permease [Streptomyces sp. CB09001] 12421.0e-170
WP_162833294.1 ABC transporter permease [Streptomyces sp. CB09001] 12441.0e-170
WP_171987373.1 ABC transporter permease [Streptomyces sp. M1013] >gb 12431.6e-170
MYS51284.1 ABC transporter permease subunit [Streptomyces sp. SID6013] 12402.4e-170

PSORT result

LocalizationCertaintyPSORT said
Not Clear