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IDSCO5224 TypeCDS
From2983043 nt length969
To2984011 aa length322
Gene pI6.37
Definitionputative araC-family transcriptional regulator M.W (Da)35407
NoteSC7E4.21c AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3030 putative AraC-family transcriptional regulator5322.0e-152
sgrSGR_2301 putative AdpA-family transcriptional regulator5107.0e-146
samSAM23877_5012 AraC family transcription regulator6060.0e+00
scabSCAB30291 putative AraC-family transcriptional regulator5607.0e-161
saceSACE_4209 transcriptional regulator, AraC family3272.0e-90
nfarnfa17020 putative transcriptional regulator3148.0e-87

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_181Helix-turn-helix domain235-31374.45.7e-21

HTH_AraC1Bacterial regulatory helix-turn-helix proteins, AraC family222-26259.42.1e-16

DJ-1_PfpI1DJ-1/PfpI family8-17451.01.2e-13

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011030121.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 16040.0e+00
WP_030868005.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 15910.0e+00
WP_003973748.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 15870.0e+00
WP_189283877.1 helix-turn-helix domain-containing protein [Streptomyces ant... 15790.0e+00
WP_193486338.1 helix-turn-helix domain-containing protein [Streptomyces ant... 15780.0e+00
MYS69265.1 helix-turn-helix domain-containing protein [Streptomyces sp. SID5... 15770.0e+00
WP_115744124.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 15740.0e+00
WP_121714770.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 15730.0e+00
WP_109033346.1 helix-turn-helix domain-containing protein [Streptomyces rub... 15730.0e+00
WP_164270785.1 helix-turn-helix domain-containing protein [Streptomyces rub... 15660.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear