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IDSCO5259 TypeCDS
From2949040 nt length951
To2949990 aa length316
GeneatrB pI9.33
DefinitionatrB permease M.W (Da)34396
Note2SC7G11.21c AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2983 putative arginine/ornithine ABC transport permease4644.0e-132
sgrSGR_2238 putative arginine/ornithine ABC transporter permease protein4077.0e-115
samSAM23877_5047 ABC-type amino acid transport system%2C permease component5780.0e+00
scabSCAB29891 putative arginine/ornithine ABC transport permease4692.0e-133
saceSACE_3966 amino acid ABC transporter, permease protein2271.0e-60
nfarnfa18900 putative ABC transporter permease2531.0e-68

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BPD_transp_11Binding-protein-dependent transport system inner membrane component88-28079.91.7e-22

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_030868032.1 amino acid ABC transporter permease [Streptomyces violaceoru... 14660.0e+00
WP_030189997.1 amino acid ABC transporter permease [Streptomyces violaceoru... 14650.0e+00
WP_003973711.1 MULTISPECIES: amino acid ABC transporter permease [Streptomy... 14640.0e+00
WP_061442596.1 amino acid ABC transporter permease [Streptomyces sp. CCM_MD... 14630.0e+00
NEB10045.1 amino acid ABC transporter permease [Streptomyces coelicoflavus] 14600.0e+00
WP_153178000.1 MULTISPECIES: amino acid ABC transporter permease [unclassif... 14590.0e+00
WP_226025237.1 amino acid ABC transporter permease [Streptomyces hyderabade... 14550.0e+00
NEB20959.1 amino acid ABC transporter permease [Streptomyces coelicoflavus] 14540.0e+00
WP_127893727.1 MULTISPECIES: amino acid ABC transporter permease [Streptomy... 14540.0e+00
WP_189738919.1 amino acid ABC transporter permease [Streptomyces tendae] >d... 14530.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear