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IDSCO5308 TypeCDS
From2886301 nt length882
To2887182 aa length293
Gene pI7.2
Definitionhypothetical protein M.W (Da)32085
NoteSC6G9.25 AseI frg.B
SignalP v.4.0Non-secretory protein | plot Categorysimilar to unknown proteins

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2946 putative DNA ligase4423.0e-125
sgrSGR_2196 conserved hypothetical protein4052.0e-114
samSAM23877_5081 DNA polymerase LigD%2C polymerase domain-containing protein5420.0e+00
scabSCAB29521 putative DNA ligase4679.0e-133
saceSACE_3549 DNA ligase (ATP)2693.0e-73
nfarnfa6770 putative ATP-dependent DNA ligase1779.0e-46

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result

no hits.

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003973663.1 MULTISPECIES: non-homologous end-joining DNA ligase [Strepto... 15220.0e+00
WP_193486292.1 non-homologous end-joining DNA ligase [Streptomyces anthocya... 15160.0e+00
WP_191849292.1 non-homologous end-joining DNA ligase [Streptomyces anthocya... 15150.0e+00
WP_106517738.1 MULTISPECIES: non-homologous end-joining DNA ligase [Strepto... 15090.0e+00
WP_121712222.1 non-homologous end-joining DNA ligase [Streptomyces sp. E5N9... 15070.0e+00
WP_136207932.1 MULTISPECIES: non-homologous end-joining DNA ligase [unclass... 15050.0e+00
WP_164275409.1 non-homologous end-joining DNA ligase [Streptomyces rubrogri... 15030.0e+00
WP_109033405.1 non-homologous end-joining DNA ligase [Streptomyces rubrogri... 14980.0e+00
MYS75132.1 ATP-dependent DNA ligase [Streptomyces sp. SID5926] 14710.0e+00
WP_115744184.1 non-homologous end-joining DNA ligase [Streptomyces sp. CB09... 14620.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear