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IDSCO5450 TypeCDS
From2732029 nt length1884
To2733912 aa length627
Gene pI6.6
Definitionputative ABC transporter M.W (Da)66951
NoteSC3D11.07c AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2791 putative ABC transporter ATP-binding protein9630.0e+00
sgrSGR_2092 putative ABC transporter ATPase and permease component9540.0e+00
samSAM23877_5192 ABC transporter10590.0e+00
scabSCAB27891 putative ABC transporter ATP-binding protein9710.0e+00
nfarnfa21480 putative ABC transporter5462.0e-156

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ABC_tran1ABC transporter407-552108.43.4e-31

ABC_membrane1ABC transporter transmembrane region64-33097.01.3e-27

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011030254.1 MULTISPECIES: ABC transporter ATP-binding protein/permease [... 26470.0e+00
WP_106517753.1 ABC transporter ATP-binding protein/permease [Streptomyces s... 26450.0e+00
WP_189284962.1 MULTISPECIES: ABC transporter ATP-binding protein/permease [... 26450.0e+00
WP_193486972.1 ABC transporter ATP-binding protein/permease [Streptomyces a... 26440.0e+00
WP_093457029.1 MULTISPECIES: ABC transporter ATP-binding protein/permease [... 26410.0e+00
WP_003973548.1 MULTISPECIES: ABC transporter ATP-binding protein/permease [... 26410.0e+00
WP_121711555.1 ABC transporter ATP-binding protein/permease [Streptomyces s... 26400.0e+00
WP_030870021.1 ABC transporter ATP-binding protein/permease [Streptomyces v... 26390.0e+00
WP_109036306.1 ABC transporter ATP-binding protein/permease [Streptomyces r... 26300.0e+00
WP_164278928.1 ABC transporter ATP-binding protein/permease [Streptomyces r... 26270.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear