-- | --

IDSCO5470 TypeCDS
From2710299 nt length1263
To2711561 aa length420
GeneglyA2 pI6.27
Definitionserine hydroxymethyltransferase M.W (Da)44776
Note AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2775 putative serine hydroxymethyltransferase7100.0e+00
sgrSGR_2047 putative serine hydroxymethyltransferase7250.0e+00
samSAM23877_5207 serine hydroxymethyltransferase8390.0e+00
scabSCAB27491 putative serine hydroxymethyltransferase6640.0e+00
saceSACE_4495 serine hydroxymethyltransferase6201.0e-178
nfarnfa48130 putative serine hydroxymethyltransferase5738.0e-165

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SHMT1Serine hydroxymethyltransferase9-388536.52.8e-161

Aminotran_1_21Aminotransferase class I and II76-36843.03e-11

Beta_elim_lyase1Beta-eliminating lyase79-34928.67.4e-07

Aminotran_51Aminotransferase class-V73-25723.71.8e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_115744316.1 MULTISPECIES: serine hydroxymethyltransferase [unclassified ... 19660.0e+00
WP_003973528.1 MULTISPECIES: serine hydroxymethyltransferase [Streptomyces]... 19660.0e+00
WP_125628714.1 MULTISPECIES: serine hydroxymethyltransferase [unclassified ... 19630.0e+00
WP_109036270.1 serine hydroxymethyltransferase [Streptomyces rubrogriseus] ... 19630.0e+00
WP_189750297.1 serine hydroxymethyltransferase [Streptomyces tendae] >dbj 19620.0e+00
WP_193486961.1 MULTISPECIES: serine hydroxymethyltransferase [Streptomyces]... 19620.0e+00
WP_030870041.1 MULTISPECIES: serine hydroxymethyltransferase [Streptomyces]... 19610.0e+00
WP_054102037.1 MULTISPECIES: serine hydroxymethyltransferase [Streptomyces]... 19600.0e+00
WP_164383158.1 serine hydroxymethyltransferase [Streptomyces sp. OM5714] >l... 19600.0e+00
WP_031039224.1 serine hydroxymethyltransferase [Streptomyces sp. NRRL F-565... 19390.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear