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IDSCO5476 TypeCDS
From2705413 nt length1008
To2704406 aa length335
Gene pI5.77
Definitionoligopeptide transport integral membrane protein M.W (Da)35744
NoteSC2A11.10 AseI frg.B
SignalP v.4.0Non-secretory protein | plot Categorymiscellaneous

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2769 putative peptide ABC transporter permease protein3593.0e-100
sgrSGR_1619 putative ABC transporter permease protein3084.0e-85
samSAM23877_5213 putative peptide transporter permease subunit: membrane component of ABC superfamily5780.0e+00
scabSCAB27421 putative peptide ABC transporter permease protein3632.0e-101

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BPD_transp_11Binding-protein-dependent transport system inner membrane component141-332101.34.6e-29

OppC_N1N-terminal TM domain of oligopeptide transport permease C34-7844.21.3e-11

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_191851264.1 ABC transporter permease [Streptomyces anthocyanicus] >dbj 12881.1e-176
WP_109036260.1 ABC transporter permease [Streptomyces rubrogriseus] >gb 12871.7e-176
WP_121713595.1 ABC transporter permease [Streptomyces sp. E5N91] 12871.8e-176
WP_003973522.1 MULTISPECIES: ABC transporter permease [Streptomyces] >gb 12871.8e-176
WP_115744322.1 ABC transporter permease [Streptomyces sp. CB09001] >gb 12852.6e-176
WP_153177838.1 MULTISPECIES: ABC transporter permease [unclassified Strepto... 12671.6e-173
WP_007444815.1 MULTISPECIES: ABC transporter permease [Streptomyces] >gb 12671.6e-173
WP_226028352.1 ABC transporter permease [Streptomyces hyderabadensis] 12671.8e-173
WP_061442429.1 ABC transporter permease [Streptomyces sp. CCM_MD2014] >gb 12645.3e-173
WP_076976431.1 MULTISPECIES: ABC transporter permease [unclassified Strepto... 12636.1e-173

PSORT result

LocalizationCertaintyPSORT said
Not Clear