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IDSCO5506 TypeCDS
From2675043 nt length3276
To2671768 aa length1091
Gene pI6.46
Definitionputative regulatory protein M.W (Da)116708
NoteSC8D9.18 AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2739 putative LuxR-family transcriptional regulator12230.0e+00
sgrSGR_2009 putative LuxR-family transcriptional regulator11180.0e+00
samSAM23877_5255 putative regulatory protein16680.0e+00
scabSCAB27151 putative LuxR-family transcriptional regulator13470.0e+00

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

AAA_161AAA ATPase domain91-24791.75.8e-26

GerE1Bacterial regulatory proteins, luxR family1020-107464.93.2e-18

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
MYU45026.1 AAA family ATPase [Streptomyces sp. SID7813] >gb 41870.0e+00
REH23735.1 regulatory LuxR family protein [Streptomyces sp. 2221.1] >emb 41830.0e+00
GGL74872.1 helix-turn-helix transcriptional regulator [Streptomyces anthocy... 41800.0e+00
AIJ13189.1 regulatory protein [Streptomyces lividans TK24] >gb 41790.0e+00
GHA73707.1 helix-turn-helix transcriptional regulator [Streptomyces anthocy... 41770.0e+00
PSK56132.1 Transcriptional regulatory protein LiaR [Streptomyces sp. 111WW2] 41770.0e+00
41740.0e+00
GHC28513.1 helix-turn-helix transcriptional regulator [Streptomyces anthocy... 41570.0e+00
WP_161270214.1 MULTISPECIES: LuxR family transcriptional regulator [Strepto... 40450.0e+00
WP_162495253.1 MULTISPECIES: LuxR family transcriptional regulator [unclass... 40440.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear