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IDSCO5556 TypeCDS
From2612812 nt length657
To2612156 aa length218
Gene pI11.9
Definitionhistone-like DNA binding protein M.W (Da)22316
NoteSC1C2.37 AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2684 putative histone-like DNA-binding protein1322.0e-32
sgrSGR_1926 putative histone-like DNA-binding protein2292.0e-61
samSAM23877_5309 DNA-binding protein HU 22431.0e-82
scabSCAB26581 putative histone-like DNA-binding protein2187.0e-58

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Bac_DNA_binding1Bacterial DNA-binding protein1-8881.92.6e-23

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_043379512.1 HU family DNA-binding protein [Streptomyces mutabilis] >gb 4305.1e-50
WP_191888321.1 HU family DNA-binding protein [Streptomyces mutabilis] >dbj 4305.1e-50
WP_127439817.1 HU family DNA-binding protein [Streptomyces sp. WAC04189] >g... 4305.3e-50
WP_219184752.1 HU family DNA-binding protein [Streptomyces sp. AC542_RSS864... 4295.6e-50
WP_030971557.1 MULTISPECIES: HU family DNA-binding protein [Streptomyces] >... 4295.6e-50
WP_100049799.1 HU family DNA-binding protein [Streptomyces sp. Alain-F2R5] ... 4295.6e-50
WP_189233035.1 HU family DNA-binding protein [Streptomyces flaveolus] >dbj 4295.8e-50
WP_225638674.1 MULTISPECIES: HU family DNA-binding protein [unclassified St... 4295.8e-50
WP_053137583.1 HU family DNA-binding protein [Streptomyces ambofaciens] >gb... 4295.8e-50
MYR44398.1 DNA-binding protein [Streptomyces sp. SID5910] 4295.8e-50

PSORT result

LocalizationCertaintyPSORT said
Not Clear