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IDSCO5696 TypeCDS
From2460833 nt length1158
To2459676 aa length385
GeneispG1 pI5.17
Definitionputative 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase M.W (Da)40796
NoteSC5H4.20 AseI frg.B
SignalP v.4.0Non-secretory protein | plot Categorysimilar to unknown proteins


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2561 putative 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase6880.0e+00
sgrSGR_1821 putative 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase7060.0e+00
samSAM23877_5417 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 27670.0e+00
scabSCAB25451 putative 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase7330.0e+00
saceSACE_5992 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase5915.0e-170
nfarnfa41180 putative 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase5869.0e-169

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

GcpE1GcpE protein22-361449.47.4e-135

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003973330.1 MULTISPECIES: flavodoxin-dependent (E)-4-hydroxy-3-methylbut... 18260.0e+00
WP_189749070.1 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphos... 18250.0e+00
WP_087806966.1 MULTISPECIES: flavodoxin-dependent (E)-4-hydroxy-3-methylbut... 18230.0e+00
WP_161347461.1 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphos... 18210.0e+00
WP_153177700.1 MULTISPECIES: flavodoxin-dependent (E)-4-hydroxy-3-methylbut... 18200.0e+00
WP_007387717.1 MULTISPECIES: flavodoxin-dependent (E)-4-hydroxy-3-methylbut... 18180.0e+00
WP_064730103.1 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphos... 18170.0e+00
WP_133889406.1 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphos... 18160.0e+00
WP_125495191.1 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphos... 18160.0e+00
WP_115744467.1 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphos... 18150.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear