-- | --

IDSCO5708 TypeCDS
From2447411 nt length483
To2446929 aa length160
Gene pI4.44
Definitionputative ribosome-binding factor M.W (Da)17358
NoteSC9F2.08c AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2549 putative ribosome-binding factor1915.0e-50
sgrSGR_1809 putative ribosome-binding factor1922.0e-50
samSAM23877_5429 Ribosome-binding factor A2878.0e-102
scabSCAB25331 putative ribosome-binding factor2544.0e-69
saceSACE_5924 ribosome-binding factor A1176.0e-28
nfarnfa40650 putative ribosome-binding factor A992.0e-22

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

RBFA1Ribosome-binding factor A6-11094.64e-27

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003973318.1 MULTISPECIES: 30S ribosome-binding factor RbfA [Streptomyces... 8073.6e-109
WP_191851178.1 MULTISPECIES: 30S ribosome-binding factor RbfA [Streptomyces... 8022.3e-108
WP_115744478.1 30S ribosome-binding factor RbfA [Streptomyces sp. CB09001] ... 7952.6e-107
WP_061442258.1 MULTISPECIES: 30S ribosome-binding factor RbfA [Streptomyces... 7873.7e-106
WP_030404965.1 MULTISPECIES: 30S ribosome-binding factor RbfA [Streptomyces... 7873.8e-106
WP_109035921.1 30S ribosome-binding factor RbfA [Streptomyces rubrogriseus]... 7874.7e-106
WP_053665439.1 30S ribosome-binding factor RbfA [Streptomyces sp. NRRL F-74... 7822.0e-105
WP_203715141.1 30S ribosome-binding factor RbfA [Streptomyces diastaticus] ... 7817.0e-105
WP_203697474.1 30S ribosome-binding factor RbfA [Streptomyces rubrogriseus] 7801.1e-104
KOX43615.1 ribosome-binding factor A [Streptomyces sp. NRRL F-7442] 7764.2e-104

PSORT result

LocalizationCertaintyPSORT said
Not Clear