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IDSCO5709 TypeCDS
From2446932 nt length906
To2446027 aa length301
Gene pI7.17
Definitionprobable tRNA pseudouridine synthase M.W (Da)31998
NoteSC9F2.07c AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2548 putative tRNA pseudouridine synthase4814.0e-137
sgrSGR_1808 putative tRNA pseudouridine synthase4831.0e-137
samSAM23877_5430 tRNA pseudouridine synthase B5450.0e+00
scabSCAB25321 putative tRNA pseudouridine synthase5315.0e-152
saceSACE_5919 hypothetical protein2701.0e-73
nfarnfa40530 putative tRNA pseudouridine synthase2341.0e-62

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

TruB_N1TruB family pseudouridylate synthase (N terminal domain)31-187158.11.7e-46

TruB_C1tRNA Pseudouridine synthase II, C terminal243-30061.54.2e-17

TruB_C_21tRNA pseudouridylate synthase B C-terminal domain188-23047.51.3e-12

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011030403.1 MULTISPECIES: tRNA pseudouridine(55) synthase TruB [Streptom... 14670.0e+00
WP_003973317.1 MULTISPECIES: tRNA pseudouridine(55) synthase TruB [Streptom... 14540.0e+00
WP_191851177.1 MULTISPECIES: tRNA pseudouridine(55) synthase TruB [Streptom... 14490.0e+00
WP_109035919.1 tRNA pseudouridine(55) synthase TruB [Streptomyces rubrogris... 14450.0e+00
WP_127896235.1 tRNA pseudouridine(55) synthase TruB [Streptomyces sp. S10(2... 14270.0e+00
WP_115744479.1 tRNA pseudouridine(55) synthase TruB [Streptomyces sp. CB090... 14260.0e+00
WP_087806954.1 tRNA pseudouridine(55) synthase TruB [Streptomyces sp. CS113... 14240.0e+00
WP_164461208.1 tRNA pseudouridine(55) synthase TruB [Streptomyces tendae] >... 14230.0e+00
WP_159330412.1 tRNA pseudouridine(55) synthase TruB [Streptomyces tendae] 14230.0e+00
WP_076976574.1 MULTISPECIES: tRNA pseudouridine(55) synthase TruB [unclassi... 14160.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear