-- | --

IDSCO5822 TypeCDS
From2296502 nt length2124
To2294379 aa length707
GeneparE pI8.35
Definitionputative DNA gyrase subunit B M.W (Da)77238
NoteSC5B8.12 AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2442 putative a subunit of topoisomerase IV12210.0e+00
sgrSGR_1698 putative DNA gyrase subunit B12090.0e+00
samSAM23877_5531 DNA gyrase subunit B13410.0e+00
scabSCAB24391 putative a subunit of topoisomerase IV13000.0e+00

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DNA_gyraseB1DNA gyrase B260-452187.99.7e-56

DNA_gyraseB_C1DNA gyrase B subunit, carboxyl terminus636-69387.54.5e-25

HATPase_c1Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase48-20372.24.3e-20

Toprim1Toprim domain481-58861.85.4e-17

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003973199.1 MULTISPECIES: type IIA DNA topoisomerase subunit B [Streptom... 35460.0e+00
WP_136207304.1 type IIA DNA topoisomerase subunit B [Streptomyces sp. LRa12... 35430.0e+00
WP_106517134.1 type IIA DNA topoisomerase subunit B [Streptomyces sp. 111WW... 35430.0e+00
WP_121716148.1 type IIA DNA topoisomerase subunit B [Streptomyces sp. E5N91... 35410.0e+00
WP_109029915.1 type IIA DNA topoisomerase subunit B [Streptomyces rubrogris... 35370.0e+00
WP_133890138.1 type IIA DNA topoisomerase subunit B [Streptomyces sp. BK208... 34990.0e+00
WP_115744574.1 type IIA DNA topoisomerase subunit B [Streptomyces sp. CB090... 34930.0e+00
WP_164411909.1 type IIA DNA topoisomerase subunit B [Streptomyces coelicofl... 34880.0e+00
WP_202493742.1 MULTISPECIES: type IIA DNA topoisomerase subunit B [Streptom... 34850.0e+00
WP_030184455.1 type IIA DNA topoisomerase subunit B [Streptomyces violaceor... 34850.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear