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IDSCO5840 TypeCDS
From2274313 nt length696
To2273618 aa length231
Gene pI11.53
Definitiontranscriptional regulator M.W (Da)25387
NoteSC9B10.07 AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2419 putative GntR-family transcriptional regulator2954.0e-81
sgrSGR_1685 putative GntR-family transcriptional regulator3261.0e-90
samSAM23877_5546 putative GntR-family transcriptional regulator3748.0e-134
scabSCAB24241 putative GntR-family transcriptional regulator3407.0e-95

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

FCD1FCD domain76-19890.78.4e-26

GntR1Bacterial regulatory proteins, gntR family7-6656.02.1e-15

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011030490.1 MULTISPECIES: GntR family transcriptional regulator [Strepto... 10941.4e-150
WP_003973181.1 MULTISPECIES: GntR family transcriptional regulator [Strepto... 10906.7e-150
WP_121716174.1 GntR family transcriptional regulator [Streptomyces sp. E5N9... 10853.3e-149
WP_109029901.1 GntR family transcriptional regulator [Streptomyces rubrogri... 10751.1e-147
EOY50817.1 Transcriptional regulator, GntR family [Streptomyces lividans 132... 9982.9e-136
WP_104631106.1 GntR family transcriptional regulator [Streptomyces sp. MH60... 9873.3e-134
WP_059297986.1 MULTISPECIES: GntR family transcriptional regulator [Strepto... 9691.6e-131
WP_030184485.1 GntR family transcriptional regulator [Streptomyces violaceo... 9649.0e-131
WP_087806802.1 GntR family transcriptional regulator [Streptomyces sp. CS11... 9612.5e-130
WP_153177582.1 GntR family transcriptional regulator [Streptomyces sp. SYP-... 9501.1e-128

PSORT result

LocalizationCertaintyPSORT said
Not Clear