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IDSCO5920 TypeCDS
From2178240 nt length1497
To2179736 aa length498
Gene pI11.79
Definitionundefined product M.W (Da)52678
NoteSC10A5.25c AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4155 putative ATP-dependent RNA helicase6810.0e+00
sgrSGR_3511 putative ATP-dependent RNA helicase7150.0e+00
samSAM23877_4274 putative DEAD-box RNA helicase8730.0e+00
scabSCAB87601 putative ATP-dependent RNA helicase8570.0e+00

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DEAD1DEAD/DEAH box helicase93-260145.81e-42

Helicase_C1Helicase conserved C-terminal domain304-40388.82.6e-25

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003973100.1 MULTISPECIES: DEAD/DEAH box helicase [Streptomyces] >gb 20790.0e+00
WP_191850763.1 DEAD/DEAH box helicase [Streptomyces anthocyanicus] >dbj 20780.0e+00
WP_093457154.1 MULTISPECIES: DEAD/DEAH box helicase [Streptomyces] >gb 20730.0e+00
WP_136208286.1 DEAD/DEAH box helicase [Streptomyces sp. LRa12] >lcl 20680.0e+00
WP_210984934.1 DEAD/DEAH box helicase [Streptomyces sp. RK76] >lcl 20630.0e+00
WP_121716313.1 DEAD/DEAH box helicase [Streptomyces sp. E5N91] 20520.0e+00
WP_217145587.1 DEAD/DEAH box helicase [Streptomyces sp. AC627_RSS907] 20130.0e+00
WP_030191975.1 DEAD/DEAH box helicase [Streptomyces violaceorubidus] 19870.0e+00
WP_225640896.1 DEAD/DEAH box helicase [Streptomyces sp. O57] 19850.0e+00
ACG60739.1 probable DEAD-box RNA helicase [Streptomyces pilosus] 19780.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear