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IDSCO6007 TypeCDS
From2080409 nt length909
To2079501 aa length302
Gene pI9.6
Definitionprobable transmembrane transport protein M.W (Da)33732
NoteSC7b7.04 AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2249 putative ABC transporter permease protein2985.0e-82
sgrSGR_1500 putative ABC transporter permease protein3223.0e-89
samSAM23877_5724 ABC transporter permease protein3032.0e-103
scabSCAB21041 putative ABC transporter permease protein2701.0e-73

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BPD_transp_11Binding-protein-dependent transport system inner membrane component111-29488.83.3e-25

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011030593.1 MULTISPECIES: carbohydrate ABC transporter permease [Strepto... 12039.0e-165
WP_003972915.1 MULTISPECIES: carbohydrate ABC transporter permease [Strepto... 12021.2e-164
WP_115744762.1 carbohydrate ABC transporter permease [Streptomyces sp. CB09... 12021.3e-164
WP_226025432.1 carbohydrate ABC transporter permease [Streptomyces hyderaba... 12011.5e-164
WP_127892577.1 carbohydrate ABC transporter permease [Streptomyces sp. S10(... 11993.4e-164
WP_133886352.1 carbohydrate ABC transporter permease [Streptomyces sp. BK20... 11993.7e-164
WP_159329006.1 carbohydrate ABC transporter permease [Streptomyces tendae] 11984.1e-164
WP_102930283.1 MULTISPECIES: carbohydrate ABC transporter permease [Strepto... 11985.0e-164
WP_109029765.1 carbohydrate ABC transporter permease [Streptomyces rubrogri... 11941.5e-163
WP_189747205.1 carbohydrate ABC transporter permease [Streptomyces tendae] ... 11941.9e-163

PSORT result

LocalizationCertaintyPSORT said
Not Clear