-- | --

IDSCO6064 TypeCDS
From2011343 nt length666
To2010678 aa length221
Gene pI9.37
Definitionprobable ABC transport permease M.W (Da)23018
NoteSC9B1.11 AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2183 putative ABC transporter permease3244.0e-90
sgrSGR_4099 putative ABC transporter permease protein1453.0e-36
samSAM23877_5779 ABC transporter permease4092.0e-148
scabSCAB81801 putative ABC transporter permease protein2401.0e-64
saceSACE_6410 amino acid ABC transporter, permease protein1049.0e-24

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BPD_transp_11Binding-protein-dependent transport system inner membrane component45-21980.01.6e-22

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011030627.1 MULTISPECIES: ABC transporter permease [Streptomyces] >gb 6962.5e-90
WP_003972857.1 MULTISPECIES: ABC transporter permease [Streptomyces] >gb 6962.7e-90
WP_109029714.1 ABC transporter permease [Streptomyces rubrogriseus] >gb 6911.6e-89
WP_115744814.1 ABC transporter permease [Streptomyces sp. CB09001] >gb 6893.7e-89
WP_226486749.1 ABC transporter permease [Streptomyces parvulus] 6841.8e-88
WP_064730363.1 ABC transporter permease [Streptomyces parvulus] >gb 6815.0e-88
WP_224292798.1 ABC transporter permease [Streptomyces olivaceus] >lcl 6771.8e-87
WP_133886308.1 ABC transporter permease [Streptomyces sp. BK208] >lcl 6721.1e-86
WP_195888198.1 ABC transporter permease [Streptomyces olivaceus] >lcl 6721.1e-86
WP_031043016.1 MULTISPECIES: ABC transporter permease [Streptomyces] >gb 6721.1e-86

PSORT result

LocalizationCertaintyPSORT said
Not Clear