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IDSCO6118 TypeCDS
From1944186 nt length975
To1943212 aa length324
Gene pI5.21
Definitionputative AraC family transcriptional regulator M.W (Da)34619
NoteSC9B2.05 AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2120 putative AraC-family transcriptional regulator4461.0e-126
sgrSGR_1129 putative AraC-family transcriptional regulator3671.0e-102
samSAM23877_5830 Transcriptional regulator%2C AraC family5090.0e+00
saceSACE_4934 AraC family transcriptional regulator2931.0e-80
nfarnfa23000 putative transcriptional regulator2862.0e-78

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Cupin_61Cupin14-204171.91e-50

HTH_181Helix-turn-helix domain242-31969.71.7e-19

HTH_AraC1Bacterial regulatory helix-turn-helix proteins, AraC family282-31962.91.7e-17

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
MYU45636.1 helix-turn-helix domain-containing protein [Streptomyces sp. SID7... 14640.0e+00
14640.0e+00
GHA60343.1 AraC family transcriptional regulator [Streptomyces anthocyanicu... 14550.0e+00
GGL40495.1 AraC family transcriptional regulator [Streptomyces anthocyanicu... 14440.0e+00
GHC04776.1 AraC family transcriptional regulator [Streptomyces anthocyanicu... 14270.0e+00
MYS77093.1 helix-turn-helix domain-containing protein [Streptomyces sp. SID5... 14170.0e+00
WP_161270265.1 AraC family transcriptional regulator [Streptomyces coelicol... 13970.0e+00
WP_168715337.1 AraC family transcriptional regulator [Streptomyces sp. LRa1... 13970.0e+00
WP_030865162.1 MULTISPECIES: AraC family transcriptional regulator [Strepto... 13880.0e+00
EHN75224.1 AraC family transcription regulator [Streptomyces coelicoflavus Z... 13800.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear