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IDSCO6119 TypeCDS
From1943201 nt length684
To1942518 aa length227
Gene pI10.36
Definitionputative AraC family transcriptional regulator M.W (Da)23609
NoteSC9B2.06 AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2119 putative AraC-family transcriptional regulator2483.0e-67
sgrSGR_1386 putative AraC-family transcriptional regulator2332.0e-62
samSAM23877_5831 putative HTH-type transcriptional regulator in mcrB 3'region3158.0e-111
scabSCAB19661 putative AraC-family transcriptional regulator2914.0e-80
saceSACE_1408 AraC family transcriptional regulator1149.0e-27
nfarnfa44620 putative transcriptional regulator1946.0e-51

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_181Helix-turn-helix domain150-22658.84.2e-16

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011030664.1 helix-turn-helix transcriptional regulator [Streptomyces coe... 8198.7e-109
WP_202493807.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 8144.8e-108
WP_121709393.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 8111.3e-107
WP_189283675.1 helix-turn-helix transcriptional regulator [Streptomyces ant... 7998.3e-106
WP_079028417.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 7981.4e-105
WP_093457242.1 MULTISPECIES: helix-turn-helix transcriptional regulator [un... 7953.3e-105
WP_191850544.1 helix-turn-helix transcriptional regulator [Streptomyces ant... 7946.1e-105
WP_030865164.1 helix-turn-helix transcriptional regulator [Streptomyces vio... 7921.1e-104
WP_136208316.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 7892.7e-104
WP_109029664.1 helix-turn-helix transcriptional regulator [Streptomyces rub... 7832.7e-103

PSORT result

LocalizationCertaintyPSORT said
Not Clear