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IDSCO6129 TypeCDS
From1935674 nt length912
To1936585 aa length303
Gene pI5.52
Definitionputative DNA binding protein M.W (Da)33976
NoteSC9B2.16c AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
samSAM23877_5845 DNA-binding protein4732.0e-171

*sam, Streptomyces ambofaciens ATCC 23877;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain47-10336.93.1e-09

HTH_31Helix-turn-helix50-10026.44.8e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
MYU45648.1 helix-turn-helix domain-containing protein [Streptomyces sp. SID7... 15810.0e+00
15630.0e+00
EFD65858.1 DNA-binding protein [Streptomyces lividans TK24] 15590.0e+00
OWA12023.1 transcriptional regulator [Streptomyces sp. CS113] 15460.0e+00
MYS74269.1 helix-turn-helix domain-containing protein [Streptomyces sp. SID5... 15410.0e+00
OWA19986.1 transcriptional regulator [Streptomyces sp. CS159] 15310.0e+00
AZM74797.1 XRE family transcriptional regulator [Streptomyces sp. KPB2] 15240.0e+00
MZG16519.1 helix-turn-helix domain-containing protein [Streptomyces sp. SID5... 15150.0e+00
GGL40614.1 transcriptional regulator [Streptomyces anthocyanicus] 15100.0e+00
MZE45448.1 helix-turn-helix domain-containing protein [Streptomyces sp. SID5... 14750.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear