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IDSCO6149 TypeCDS
From1917377 nt length1101
To1916277 aa length366
Gene pI5.94
Definitionputative integral membrane nucleotide binding protein M.W (Da)38706
NoteSC1A9.13 AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2086 putative ATP/GTP-binding protein5613.0e-161
sgrSGR_1369 conserved hypothetical protein5339.0e-153
samSAM23877_5864 putative ribosome biogenesis GTPase RsgA6370.0e+00
scabSCAB19351 putative GTPase5915.0e-170
saceSACE_7050 putative ATP/GTP-binding protein3089.0e-85
nfarnfa2160 hypothetical protein2941.0e-80

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DUF2581Protein of unknown function, DUF25893-268157.23.1e-46

MMR_HSR1150S ribosome-binding GTPase204-28431.21.6e-07

ABC_tran1ABC transporter198-23224.43.1e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011030687.1 MULTISPECIES: ribosome small subunit-dependent GTPase A [Str... 18120.0e+00
WP_003972773.1 MULTISPECIES: ribosome small subunit-dependent GTPase A [Str... 18060.0e+00
WP_193485403.1 ribosome small subunit-dependent GTPase A [Streptomyces anth... 18030.0e+00
WP_030865202.1 ribosome small subunit-dependent GTPase A [Streptomyces viol... 17960.0e+00
WP_136208303.1 ribosome small subunit-dependent GTPase A [Streptomyces sp. ... 17930.0e+00
WP_121711042.1 ribosome small subunit-dependent GTPase A [Streptomyces sp. ... 17680.0e+00
WP_109029636.1 ribosome small subunit-dependent GTPase A [Streptomyces rubr... 17650.0e+00
WP_159328134.1 ribosome small subunit-dependent GTPase A [Streptomyces tend... 17610.0e+00
WP_189747424.1 ribosome small subunit-dependent GTPase A [Streptomyces tend... 17600.0e+00
WP_161380684.1 MULTISPECIES: ribosome small subunit-dependent GTPase A [Str... 17450.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear