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IDSCO6194 TypeCDS
From1863437 nt length840
To1864276 aa length279
Gene pI11.05
Definitionputative transcriptional regulator M.W (Da)28571
NoteSC2G5.15c AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2032 putative LuxR-family transcriptional regulator2532.0e-68
sgrSGR_1335 putative LuxR-family transcriptional regulator2863.0e-78
samSAM23877_5928 putative response regulator3527.0e-124
scabSCAB18641 putative LuxR-family transcriptional regulator2611.0e-70
saceSACE_3053 putative transcriptional regulator1525.0e-38
nfarnfa41520 putative transcriptional regulator1662.0e-42

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

GerE1Bacterial regulatory proteins, luxR family217-27151.74.2e-14

GAF1GAF domain55-14522.60.00011

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_093457267.1 MULTISPECIES: helix-turn-helix transcriptional regulator [un... 8081.7e-105
WP_189747513.1 LuxR C-terminal-related transcriptional regulator [Streptomy... 7891.3e-102
WP_038534278.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 7855.2e-102
WP_011030730.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 7855.2e-102
WP_161377970.1 MULTISPECIES: helix-turn-helix transcriptional regulator [un... 7839.6e-102
WP_087806479.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 7784.8e-101
WP_159329282.1 helix-turn-helix transcriptional regulator [Streptomyces ten... 7778.7e-101
WP_059298527.1 helix-turn-helix transcriptional regulator [Streptomyces can... 7779.5e-101
WP_210977963.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 7761.4e-100
WP_076976961.1 MULTISPECIES: helix-turn-helix transcriptional regulator [un... 7732.8e-100

PSORT result

LocalizationCertaintyPSORT said
Not Clear