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IDSCO6208 TypeCDS
From1844794 nt length369
To1844426 aa length122
Gene pI4.76
Definitionhypothetical protein M.W (Da)13193
NoteSC2G5.29 AseI frg.B
SignalP v.4.0Non-secretory protein | plot Categorysimilar to unknown proteins

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2021 putative DNA-binding protein2042.0e-54
sgrSGR_1312 conserved hypothetical protein1866.0e-49
samSAM23877_5948 putative DNA-binding protein2215.0e-77
scabSCAB18551 putative DNA-binding protein2135.0e-57
saceSACE_6733 DNA-binding protein1004.0e-23

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_221HTH domain56-11774.45e-21

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003972719.1 MULTISPECIES: DNA-binding protein [Streptomyces] >gb 6232.5e-82
WP_104634525.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 6181.6e-81
WP_115744936.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 6171.7e-81
WP_226029421.1 helix-turn-helix domain-containing protein [Streptomyces hyd... 6153.6e-81
WP_142200972.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 6154.0e-81
WP_191850593.1 helix-turn-helix domain-containing protein [Streptomyces ant... 6154.5e-81
WP_133886181.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 6121.1e-80
WP_216719261.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 6051.4e-79
WP_102929565.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 6051.5e-79
WP_061441836.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 6016.2e-79

PSORT result

LocalizationCertaintyPSORT said
Not Clear