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IDSCO6236 TypeCDS
From1806733 nt length876
To1807608 aa length291
Gene pI8.46
Definitionputative DNA binding protein (partial CDS) M.W (Da)32651
NoteSC2H4.18c SCAH10.01c AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5754 putative DNA-binding protein3617.0e-101
scabSCAB58481 putative DNA-binding protein3694.0e-103

*avm, Streptomyces avermitilis; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain33-9248.29.2e-13

HTH_31Helix-turn-helix38-8627.52.2e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
MYU45755.1 helix-turn-helix domain-containing protein [Streptomyces sp. SID7... 13620.0e+00
CAD55377.1 putative DNA-binding protein [Streptomyces coelicolor A3(2)] 13610.0e+00
AIJ12407.1 DNA-binding protein [Streptomyces lividans TK24] >gb 13550.0e+00
EHN75152.1 DNA-binding protein [Streptomyces coelicoflavus ZG0656] >gb 13260.0e+00
WP_174855338.1 Scr1 family TA system antitoxin-like transcriptional regulat... 13210.0e+00
PPS82903.1 hypothetical protein BZZ08_04906 [Streptomyces sp. MH60] 13200.0e+00
WP_171987474.1 Scr1 family TA system antitoxin-like transcriptional regulat... 13140.0e+00
AIV33472.1 DNA-binding protein [Streptomyces sp. CCM_MD2014] 13130.0e+00
OWA20062.1 transcriptional regulator [Streptomyces sp. CS159] 13130.0e+00
EFD65757.1 DNA-binding protein [Streptomyces lividans TK24] 12901.3e-178

PSORT result

LocalizationCertaintyPSORT said
Not Clear