-- | --

IDSCO6257 TypeCDS
From1788211 nt length1005
To1787207 aa length334
Gene pI4.8
Definitionputative ABC transport system sugar binding lipoprotein M.W (Da)35151
NoteSCAH10.22 AseI frg.B
SignalP v.4.0Signal peptide | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1983 putative simple sugar ABC transporter substrate-binding protein5185.0e-148
sgrSGR_1275 putative ABC transporter sugar-binding lipoprotein5161.0e-147
samSAM23877_5980 ABC transport system sugar binding lipoprotein6440.0e+00

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Peripla_BP_41Periplasmic binding protein domain53-297133.68.4e-39

Peripla_BP_11Periplasmic binding proteins and sugar binding domain of LacI family63-27450.81.4e-13

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011030773.1 sugar ABC transporter substrate-binding protein [Streptomyce... 15900.0e+00
WP_191850625.1 sugar ABC transporter substrate-binding protein [Streptomyce... 15850.0e+00
WP_136208369.1 sugar ABC transporter substrate-binding protein [Streptomyce... 15820.0e+00
WP_210984281.1 sugar ABC transporter substrate-binding protein [Streptomyce... 15820.0e+00
WP_030865388.1 MULTISPECIES: sugar ABC transporter substrate-binding protei... 15770.0e+00
WP_003972669.1 MULTISPECIES: sugar ABC transporter substrate-binding protei... 15730.0e+00
WP_109029547.1 sugar ABC transporter substrate-binding protein [Streptomyce... 15710.0e+00
WP_087806387.1 sugar ABC transporter substrate-binding protein [Streptomyce... 15690.0e+00
WP_121715286.1 sugar ABC transporter substrate-binding protein [Streptomyce... 15680.0e+00
WP_007388104.1 MULTISPECIES: sugar ABC transporter substrate-binding protei... 15670.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear