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IDSCO6410 TypeCDS
From1590196 nt length252
To1589945 aa length83
Gene pI9.79
Definitionhypothetical protein M.W (Da)8732
NoteSC3C8.29 AseI frg.A
SignalP v.4.0Non-secretory protein | plot Categorysimilar to unknown proteins

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1955 putative DNA-binding protein1021.0e-23
sgrSGR_1236 putative DNA-binding protein1364.0e-34
samSAM23877_6026 hypothetical protein1276.0e-41
scabSCAB18051 putative DNA-binding protein1243.0e-30

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain16-7449.82.9e-13

HTH_31Helix-turn-helix21-7435.56.7e-09

HTH_261Cro/C1-type HTH DNA-binding domain20-7527.04e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003972569.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 1927.1e-18
WP_007445836.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 1911.1e-17
WP_115745036.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 1911.2e-17
WP_087806210.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 1901.6e-17
WP_164382066.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 1883.7e-17
WP_030404576.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 1873.9e-17
WP_053662954.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 1875.0e-17
WP_109028413.1 helix-turn-helix domain-containing protein [Streptomyces rub... 1866.5e-17
WP_164419973.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 1841.3e-16
WP_133889334.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 1831.6e-16

PSORT result

LocalizationCertaintyPSORT said
Not Clear